An example on how to load BAM file and preview sequence information (in R Markdown). Source code for the R Markdown Notebook is available at a GitHub repository.
![Loading BAM files with R](https://www.mindyourdata.org/wp-content/uploads/2022/03/dna-bam-transparent-1024x660.jpg)
An example on how to load BAM file and preview sequence information (in R Markdown). Source code for the R Markdown Notebook is available at a GitHub repository.
Based on R Bioconductor Sushi package I created a step-by step guide of how to produce a Manhattan plot for a genom-wide associaction study (GWAS).